FFCP PHASE1:Hg19::chr12:71031281..71031292,-
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| Short description: | p12@PTPRB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_PTPRB_5end |
| Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
| Association with transcript: | -61bp_to_ENST00000334414, ENST00000552253, NM_001109754_5end |
| EntrezGene: | PTPRB |
| HGNC: | 9665 |
| UniProt: | P23467Q86VA4 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p12@PTPRB |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 7.76e-70 | 24 |
| endothelial cell | 8.13e-65 | 36 |
| lymphangioblast | 8.76e-59 | 6 |
| endothelial cell of lymphatic vessel | 8.76e-59 | 6 |
| vascular lymphangioblast | 8.76e-59 | 6 |
| meso-epithelial cell | 1.16e-51 | 45 |
| lining cell | 7.48e-40 | 58 |
| barrier cell | 7.48e-40 | 58 |
| blood vessel endothelial cell | 5.29e-28 | 18 |
| embryonic blood vessel endothelial progenitor cell | 5.29e-28 | 18 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic vessel | 3.69e-44 | 8 |
| lymph vasculature | 3.69e-44 | 8 |
| lymphatic part of lymphoid system | 3.69e-44 | 8 |
| lymphoid system | 2.25e-35 | 10 |
| blood vessel endothelium | 5.29e-28 | 18 |
| endothelium | 5.29e-28 | 18 |
| cardiovascular system endothelium | 5.29e-28 | 18 |
| endothelial tube | 2.11e-25 | 9 |
| arterial system endothelium | 2.11e-25 | 9 |
| endothelium of artery | 2.11e-25 | 9 |
Showing 1 to 10 of 44 entries
| Ontology term | p-value | n |
|---|---|---|
| chondrosarcoma | 5.56e-16 | 1 |
| extraosseous chondrosarcoma | 5.56e-16 | 1 |
| myxoid chondrosarcoma | 5.56e-16 | 1 |
| extraskeletal myxoid chondrosarcoma | 5.56e-16 | 1 |
Showing 1 to 4 of 4 entries
